Gribskov Lab

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    Announcements

    Location

    We are located on the third floor of the Hockmeyer Hall of Structural Biology at Purdue University (HOCK on the campus map).  We also have a lab facebook page

    People

    Current Students

    Former Students

    • Qiong Wu - PhD, Office: Hock 334, X46207, email: wu41@purdue.edu, office: X48124
    • James Hengenius - PhD, Post-Doctoral Researcher at University of Pittsburgh.
    • Greg Ziegler - PhD, email: gziegler@purdue.edu, Office: X46207, Cell: 573 795 3678
    • Patrick Dolan - PhD, Post-Doctoral Researcher at Stanford University.
    • Reazur Rahman - PhD, Post-Doctoral Research Scientist at Brandeis University, Waltham MA.  
      email: reazur@gmail.com Cell: 609 240 9307
    • Minming Li - M.S. Cell: 765 418 0831
    • Prasad Siddavatam - PhD, Senior Research Scientist at Serologix LLC
      email: siddavatam@gmail.com, cell: 765-543-7584
    • Aditi Gupta - PhD,  Postdoctoral Scientist at Michigan State University, 
      email: agupta@msu.edu, but gmail preferred aditi9783@gmail.com
      1501 East Lansing Drive, Apt 1, East Lansing, MI 48823.
    • Kejie Li - PhD, Computational Biologist at Biogen Idec
       email: likejie@gmail.com, 87 New St., Unit 410, Cambridge MA, 02138, cell: 317-348-0768,
      MSN space: http://spaces.msn.com/likejie
    • Jin Tae Kwak - MS
    • Omer Ahmad - MS
    • Jennie Gu - PhD (UCSD)
    • Christina Zheng - PhD (UCSD)
    • Lynn Fink - PhD (UCSD)

    Group Meetings

    Everyone - 12:00pm-1:30pm Monday, HOCK 330

    Speaker Date Topic
    Huang 25 Apr defense rehearsal
      2 May cancelled
    Gribskov 9 May summer planning.  Shall we read a book?  Do a project?
      16 May  
      23 May  
      30 May  
      6 Jun  
      13 Jun no meeting
      20 Jun no meeting
      27 Jun  
      4 July  
      11 July  
      18 July no meeting
      25 July  
      1 August  
      8 August probably no meeting
      15 August probably no meeting
      22 August  

    Normal rotation: Gribskov, J Wang, Liu, Sun, Yang, S Wang

    Conferences

    Please add conferences that you think are relevant.  

    General links


    Gold Shading indicates "Needs Update"  please help!

    Light Blue Shading indicates "Past Due".

    AICoB

    INTERNATIONAL CONFERENCE ON ALGORITHMS FOR COMPUTATIONAL BIOLOGY

    • Deadline: Feb 2, 2016
    • Trujillo, Spain
    • June 21-23, 2016

    BIBM

    IEEE International Conference on Bioinformatics and Biomedicine 

    • DEC 15 - 18, 2016
    • Shenzhen China.
    • Electronic submission of full papers: Aug. 14 , 2016
      Notification of paper acceptance: October 15, 2016
      Camera-ready of accepted papers: Nov 5, 2016 

    BICob

    International Conference on Bioinformatics and Computational Biology

    • April 4-6
    • Las Vegas, NV, USA
    • Paper Submission Deadline: October 30, 2015.
    • Notification of Acceptance: December 18, 2015.
    • Pre-registration and Camera-ready paper: January 20, 2016.

    APBC

    The 15th Asia Pacific Bioinformatics Conference

    • 16 - 18 Jan, 2017
    • Shenzhen, China
    • Submission Deadline: July 30, 2016
    • Author Notification: August 30, 2016
    • Final Version Due: October 1, 2016

    RECOMB

    International Conference on Research in Computational Molecular Biology

    • Apr 17 - 21, 2016
    • UCLA, Los Angeles, CA
    • Paper Submission Deadline: Oct 26, 2015
    • Paper Acceptance Decision: Dec 15, 2015
    • Final version of papers due: Jan 15, 2016
    • Travel fellowship application deadline: Feb 15, 2016
    • Early registration deadline: Mar 1, 2016

    ISBRA

    INTERNATIONAL SYMPOSIUM ON BIOINFORMATICS RESEARCH AND APPLICATIONS

    • June 5-8, 2016
    • Minsk, Belarus
    • Submission deadline- February 15, 2016
    • Notification of acceptance- March 15, 2016
    • Final version due- March 31, 2016

    GLBIO

    Great Lakes Bioinformatics Conference 2016 and Canadian Computational Biology Conference

    • 16 - 19 May, 2016
    • University of Toronto
    • Deadline: Feb 1, 2016 for full-length paper submission

    iCBBE

    International Conference on Bioinformatics and Biomedical Engineering

    • Sept 20 - 22, 2016
    • Xi'an, China
    • Paper submission: March 16, 2016

    ISMB

    24th International Conference on Intelligent Systems for Molecular Biology

    • Orlando, Florida
    • 8 - 12 July, 2016
    • Proceeding paper submission deadline: Jan 15, 2016
    • Acceptance notification: Feb 19, 2016

    ACM-BCB

    ACM Conference on Bioinformatics, Computational Biology and Biomedical Informatics

    • Conference Date: OCT 2 - 5, 2016
    • Seattle, WA
    • Paper submission deadline: May 20, 2016
    • Notification sent to authors: July 15, 2016

    IEEE-ISB

    The 10th IEEE International Conference on Systems Biology (ISB 2016)

    • Conference Date: Aug 19-22, 2016
    • Weihai, Shandong, China
    • Paper submission deadline: June 30, 2016
    • Paper acceptance notification: July 10, 2016

    ICSB

    17th International Conference on Systems Biology (ICSB-2016)

    • Sept 16-20, 2016
    • Barcelona, Spain.
    • Abstract deadline: June 1, 2016.

    Reading

    Requests

    • none right now

    Fun Stuff

    Mandelbrot

    As usual Wikipedia is a good start if you want to know more.  Sadly, Benoit Mandelbrot died 14 October 2010, at age 85.

    Eterna - RNA folding for the masses

    • teams seem to be active again gribskov 7 Mar 2013
    • learn about RNA folding and indulge your competitive feelings at the same time
    • our team name is XIOS

    NetLogo - Agent based programming

     

    Widespread RNA and DNA Sequence Differences in the Human Transcriptome pdf

    Social Events

    None currently scheduled.  Why not?