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    RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease
    sp|P10978.1|POLX_TOBAC13281
    Alignment statistics for match #1
    Score Expect Method Identities Positives Gaps Frame
    359 bits(921) 3e-103 Compositional matrix adjust. 170/297(57%) 225/297(75%) 1/297(0%) +3
    Query  12    LSTQFSMKDLGDANHFLGMRIKRDRQRGILELSQEKYIHKVLQRFSMQGGKSLSTPMQAY  191
                 LS  F MKDLG A   LGM+I R+R    L LSQEKYI +VL+RF+M+  K +STP+  +
    Sbjct  1029  LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH  1088
    
    Query  192   SKLGKEDSPKTDAEKEEMAKVPYSSAVGNLMYAMVAMRPDIAHAVGVVSRYMSNPGKKHW  371
                  KL K+  P T  EK  MAKVPYSSAVG+LMYAMV  RPDIAHAVGVVSR++ NPGK+HW
    Sbjct  1089  LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW  1148
    
    Query  372   EAVKKILRYLKGTSSKCLRFGNSDASIVGYTDADYAGCVDTRRSTSGYVFMFAGAAISWR  551
                 EAVK ILRYL+GT+  CL FG SD  + GYTDAD AG +D R+S++GY+F F+G AISW+
    Sbjct  1149  EAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQ  1208
    
    Query  552   SCLQDCTSSSTTEAEYVAASDANKEAIWLARLVGDLGIHEVP-VVHCDSQSAIALAKNPV  728
                 S LQ C + STTEAEY+AA++  KE IWL R + +LG+H+   VV+CDSQSAI L+KN +
    Sbjct  1209  SKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSM  1268
    
    Query  729   FHSKSKHIEVRYHVIRDVLAGKRIELVKVHTDDNPADALTKSLASERFAHCIELMGV  899
                 +H+++KHI+VRYH IR+++  + ++++K+ T++NPAD LTK +   +F  C EL+G+
    Sbjct  1269  YHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM  1325
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