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JieYin

    Education

    Ph.D. Major: Horticulture

    Purdue University                                                                                          Aug-2009 to Present

     

    B.S. Major: Natural Resources and Environment

    Nanjing Agricultural University (China)                                                                          Jun 2008

     

    Membership in Professional Organizations

    American Society of Plant Biologists

    American Statistical Association

     

    Professional Experience

    Graduate Assistant in the Bioinformatics Core (Present)

    Graduate Research /Teaching Assistant (2009-2014) 

    Research

    Projects

    Predawn stomatal opening (PDO)

    Transcriptomics and metabolics

    Plant water use efficiency (WUE) and QTL mapping

    Posters and Conferences

    2013-2014:

    “Candidate genes associated with water use efficiency (WUE) identified from quantitative trait loci (QTL) mapping in Eutrema salsugineum” ASPB mid-west 2014, Mar-2013

    2012-2013:

    “Candidate Genes Associated with Water Use Efficiency (WUE) Identified from A Combination of Quantitative Trait Loci (QTL) Mapping and Transcriptome Profiling in Eutrema salsugineum” ASPB 2013, Jul-2013

    2011-2012:

    “Determination of the Genetic Basis of Water Use Efficiency in Eutrema salsugineum via Bulked Segregant Analysis (BSA)” HLA Research Retreat, May-2012

    “Interactions between Omics and Statistics: Analyzing High Dimensional Data”, 8th International Purdue Symposium on Statistics, Jun-2012

    “Identification of Genetic Basis of Water Use Efficiency in Eutrema salsugineum via QTL Mapping” Plant Sciences Social, Oct-2012

    2010-2011:

    “Genetic Basis of Water Use Efficiency in Eutrema salsugineum” Plant Sciences Social, Mar-2011

    “Genetic Basis of Water Use Efficiency in Eutrema salsugineum” HLA Research Retreat, May-2011

    “Advantages of Transcriptome Differences of Eutrema salsugineum” Das-Purdue Workshop, Sep-2011

    Manuscripts

    1. Predawn stomatal opening is a heritable in trait regulated by osmotic stress via ABA in Eutrema salsugineum. (Manuscript in preparation)

    2. Transcriptomic and Metabolic Profiling of Two Eutrema salsugineum Accessions with Contrasting Water Use Efficiency (WUE). (Manuscript in preparation)

    3. Biomass production is the significant determinant to heritable trait water use efficiency (WUE) in Eutrema salsugineum. (Manuscript in preparation)

    Skills

    Sequencing data processing: Bowtie2, TopHat, Cufflinks SAMtools, Genome Assembly Tool Kit (GATK), etc.

    Coding: Perl

    Statistical analysis: SAS, R.

    Molecular biology: DNA/RNA extraction, semi-quantitative PCR, quantitative PCR

     

    Perl scripts:

    add_geneinfo.pl

    filterSNP

    Contact info

    Cell: (765) 481-1896 Phone: (765) 494-0079

    E-mail: jie.yin@aol.com

    Linkin:https://www.linkedin.com/profile/view?id=105301308&trk=nav_responsive_tab_profile

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