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Introduction to Systems Biology

    alon_cover.jpgAn Introduction to Systems Biology: Design Principles of Biological Circuits

    Uri Alon

    Systems Biology reading Fall 2010

     

    • 17 Oct, all, Ch 1-3
    • 22 Oct, M.Li, Ch 4.1-4.5; Hengenius, MATLAB
    • 29 Oct - M.Li, Ch 4.6-4.10
    • 5 Nov - Wu, Ch 5
    • 12 Nov - Gribskov, Ch 6
    • 19 Nov - Gupta, Ch 7
    • 26 Nov - Thanksgiving
    • 29 Nov, 3:30 - 5 pm - Huang, Ch 9
    • 10 Dec - Hengenius, Ch 8
    • 17 Dec - M.Li, Ch 10

     

    I have attached some example MATLAB code in "examples.zip".  Inside are .mat files (containing parameters and initial conditions) and .m files (functions and scripts).  The function .m files contain ODEs.  The script .m file "model_plot.m"  shows you how to call the ODEs in MATLAB's ODE solvers.

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