Was this page helpful?

Sequence Annotated as Predicted by Programs

    Table of contents
    No headers
    • Base Pair Positions 1 - 50,000

    The genes predicted by GeneMark in comparison to the repeat masked sequence can be seen here.

    • Base Pair Positions 50,000 - 100,000 :

    The genes predicted by GeneMark and FGENESH on the positive strand of the unmasked sequence can be seen here.

    The genes predicted by GeneMark and FGENESH on the negative strand of the unmasked sequence can be seen here.

    • Base Pair Positions 100,000- 150,000 :

    The results from GeneMark and FGENESH can be visualized from here. There you can see what predicted regions of the sequences are common between both programs and which ones are not. 

    A comparision between the results from GeneMark, FGENESH and RepeatMasker is available here. There you can see what predicted regions have been masked by RepeatMasker.

    Was this page helpful?
    Tag page (Edit tags)
    • No tags
    You must login to post a comment.