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Document clustering

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    Required Reading

    1. Text mining and ontologies in biomedicine: Making sense of raw text. (Review) Link
        Spasic I, Ananiadou S, McNaught J, Kumar A.
    Brief Bioinform. 2005 Sep;6(3):239-51.

    2. A comparative comparison study of document clustering for a biomedical digital library MEDLINE. Link

    3.Automatic document classification of biological literature. Link
       Chen D, Müller HM, Sternberg PW
    BMC Bioinformatics. 2006 Aug 7;7:370

    4.PuReD-MCL: a graph-based PubMed document clustering methodology. Link
        Theodosiou T, Darzentas N, Angelis L, Ouzounis CA.
    Bioinformatics. 2008 Sep 1;24(17):1935-41. Epub 2008 Jul 1.

    Further Reading

    1. short and sweet review on textmining:
        Getting started in text mining Link
        Getting started in text mining: part two Link

    2. A basic tutorial on information retrieval Link

    3. Machine Learning in Automated Text Categorisation. (Book Chapter) Link

    4. A document clustering and ranking system for exploring MEDLINE citations. Link
       Lin Y, Li W, Chen K, Liu Y.
    J Am Med Inform Assoc. 2007 Sep-Oct;14(5):651-61. Epub 2007 Jun 28.

    5. Clustering engines to play with:
    Clusty offered by vivisimo
    Carrot2

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